Main points to consider when designing Web sites
I am a professor of marine ecology and data sciences at the Complexys and Biosciences Institutes, University of Mons (UMONS), Belgium. My research interests include coral ecophysiology, artificial reef mesocosms, automatic identification of plankton images, growth models (see my Ph.D. thesis), machine learning algorithms, evolution and ecology of open source software. I lead the Numerical Ecology of Aquatic Systems unit, which studies coral and plankton, and develops software for the ecologist.
I teach the whole curriculum of data sciences to students in biology at the Faculty of Science at UMONS where we emphasize the importance of good practice for reproducible research and open science. I am also in charge of the courses in marine ecology, ecophysiology, oceanography, and aquariology at UMONS.
I am a creative person who spends a lot of time thinking about (new) ways to solve problems. I like to dig in data with my favorite environment: a customised R session (I also maintain more than a dozen R package on CRAN and elsewhere). I am convinced that Science has to be Open and Reproducible, and the scientific community is slowly transiting in that direction. I use R, R Studio, the tidyverse, Git, Github and Travis-CI, plus the SciViews Box, as means to do reproducible research.
When I am not working, you can find me in my garden, or on a yoga mat. I am married to a wonderful and bright italian girl and I have a boy that happens to be equally creative (more in art than in science) and as technology addict as me. I also like photography, scuba diving, Indian or Japanese cooking, cartoons, good but healthy food, beer, wine, green tea and many, many more...
PhD in Marine Biology, 2001
Université Libre de Bruxelles
Master in Agricultural Bioengineering, orientation Applied Zoology, 1991
Université Libre de Bruxelles
Bachelor in Bioengineering, 1989
Université Libre de Bruxelles
The SciViews Box is a preconfigured virtual machine for data analysis in a reproducible way
Create a beautifully simple personal or academic website in under 10 minutes.
This is a brief guide to managing content with the Academic framework. Content can include publications, projects, talks, news/blog articles, and widget pages. After you have read this guide about creating and managing content, you may also be interested to learn about writing content with Markdown, LaTeX, and Shortcodes.
SciViews provides a series of open source software to supplement R, for statistical computing in a reproducible workflow: R packages and the SciViews Box.
ECOS investigates whether knowledge on the evolution of biological ecosystems can provide support to optimize the fitness, resistance and resilience of software ecosystems.
ZooImage allows to analyze plankton samples by means of image analysis and machine learning techniques to get abundances, biomasses, and size spectra per group.
Studying changes induced by ocean acidification in coral reef ecosystems in artificial mesocosms, focusing on long-term effects to take acclimation into account.
Courses at UMONS
I am a teaching instructor for the following courses at the Faculty of Science at the University of Mons, Belgium: