Philippe Grosjean
Marine Ecologist, Biostatistician, Software Developer and Enthousiast UseR 🐙

Curriculum Vitae (PDF)

Selected Publications

Full list of publications (UMONS)

The RAPID project presents the state of the art in the application of image analysis and machine learning applied to digital plankton images, as well as, perspectives.
Oceanography, 2007.

The FLR framework (Fisheries Library for R) is a development effort directed towards the evaluation of fisheries management strategies.
ICES J. Mar. Sci., 2007.

A new system, known as ZOOSCAN, has been designed for counting zooplankton net samples. We describe image-processing and the results of (semi)-automatic identification of taxa with various machine-learning methods.
ICES J. Mar. Sci., 2004.

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SciViews - Reproducible research with R

SciViews provides a series of open source software to supplement R, for statistical computing in a reproducible workflow: R packages and the SciViews Box.

Ecological Studies of Open Source Software Ecosystem

ECOS investigates whether knowledge on the evolution of biological ecosystems can provide support to optimize the fitness, resistance and resilience of software ecosystems.

ZooImage - (zoo)plankton image analysis

ZooImage allows to analyze plankton samples by means of image analysis and machine learning techniques to get abundances, biomasses, and size spectra per group.

Coral reef ecology in acidified mesocosms

Studying changes induced by ocean acidification in coral reef ecosystems in artificial mesocosms, focusing on long-term effects to take acclimation into account.


Courses at UMONS

I am a teaching instructor for the following courses at the Faculty of Science at the University of Mons, Belgium: